Top cofit genes for PP_0547 from Pseudomonas putida KT2440

UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
SEED: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-)
KEGG: UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0138		conserved membrane protein of unknown function	0.72	0.66
2	PP_1058		conserved protein of unknown function	0.74	0.55
3	PP_0396		conserved protein of unknown function	0.47	0.52
4	PP_0397		protein kinase	0.52	0.52
5	PP_0395		putative type IV piliation protein	0.61	0.52
6	PP_4785		conserved exported protein of unknown function	0.66	0.49
7	PP_1198		transcriptional regulator, Cro/CI family (higA antitoxin like)	0.41	0.49
8	PP_4994		conserved protein of unknown function	0.44	0.48
9	PP_1898		MotA/TolQ/ExbB proton channel family protein	0.59	0.46
10	PP_0406		Nucleotidyltransferase family protein	0.93	0.43
11	PP_4803		D-alanyl-D-alanine carboxypeptidase	0.39	0.43
12	PP_4824		Sensor histidine kinase/response regulator	no	0.40
13	PP_1733		membrane ATPase of the MinC-MinD-MinE system	0.87	0.39
14	PP_3649		Transcriptional regulator, GntR family	no	0.38
15	PP_1623		RNA polymerase, sigma S (sigma 38) factor	0.37	0.38
16	PP_0123		DNA polymerase I, 5	0.30	0.37
17	PP_0951		Ribosome hibernation promoting factor	0.88	0.37
18	PP_0949		putative ATP-binding protein UPF0042	0.97	0.37
19	PP_4722		Transcription elongation factor GreA	0.90	0.37
20	PP_4902		Oligoribonuclease	no	0.37

Or look for negative cofitness