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  • Top cofit genes for PP_0535 from Pseudomonas putida KT2440

    Outer membrane ferric siderophore receptor
    SEED: TonB-dependent siderophore receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.20
    2 PP_4100 Transcriptional regulator, Cro/CI family no 0.19
    3 PP_4924 Serine protease, subtilase family no 0.19
    4 PP_2072 Transcriptional regulator, AraC family no 0.18
    5 PP_0272 Outer membrane ferric siderophore receptor no 0.18
    6 PP_1030 conserved protein of unknown function no 0.18
    7 PP_0582 Thiolase family protein no 0.17
    8 PP_4862 3-hydroxy acid dehydrogenase, NADP-dependent / malonic semialdehyde reductase no 0.17
    9 PP_4171 conserved exported protein of unknown function no 0.17
    10 PP_0026 putative cobalt/cadmium/zinc exporter no 0.15
    11 PP_0151 conserved exported protein of unknown function no 0.15
    12 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.15
    13 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.31 0.15
    14 PP_4645 Large-conductance mechanosensitive channel no 0.15
    15 PP_5060 conserved protein of unknown function no 0.15
    16 PP_0300 putative metallopeptidase no 0.15
    17 PP_4955 conserved exported protein of unknown function no 0.15
    18 PP_4231 putative Xanthine dehydrogenase accessory factor no 0.15
    19 PP_1798 Outer membrane efflux protein no 0.15
    20 PP_5136 ABC transporter, permease protein no 0.15

    Or look for negative cofitness