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  • Top cofit genes for PP_0534 from Pseudomonas putida KT2440

    putative Transcriptional regulator PfeR
    SEED: Two-component response regulator PfeR, enterobactin

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4100 Transcriptional regulator, Cro/CI family no 0.24
    2 PP_3398 putative Curli fiber surface-exposed nucleator CsgB no 0.23
    3 PP_2025 Exonuclease SbcD no 0.23
    4 PP_0907 RND efflux membrane fusion protein-related protein no 0.22
    5 PP_2434 conserved protein of unknown function no 0.22
    6 PP_3581 conserved membrane protein of unknown function 0.23 0.22
    7 PP_0556 Acetoin catabolism protein no 0.22
    8 PP_2236 putative hydrolase of the alpha/beta superfamily no 0.22
    9 PP_1455 conserved protein of unknown function no 0.22
    10 PP_3589 serine:H+ symport permease, threonine-insensitive no 0.21
    11 PP_3018 conserved protein of unknown function no 0.21
    12 PP_5651 conserved protein of unknown function no 0.21
    13 PP_5265 Xanthine phosphoribosyltransferase no 0.21
    14 PP_5715 protein of unknown function no 0.20
    15 PP_2210 LysR family transcriptional regulator no 0.20
    16 PP_1504 conserved protein of unknown function no 0.20
    17 PP_5144 conserved protein of unknown function no 0.20
    18 PP_4611 RNA polymerase sigma-70 factor, ECF subfamily no 0.20
    19 PP_2363 conserved protein of unknown function no 0.20
    20 PP_4606 putative Outer membrane ferric siderophore receptor no 0.20

    Or look for negative cofitness