Top cofit genes for PP_0513 from Pseudomonas putida KT2440

DNA-binding transcriptional repressor NrdR-Zn2+-ATP/dATP
SEED: Ribonucleotide reductase transcriptional regulator NrdR
KEGG: transcriptional repressor NrdR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4684		conserved protein of unknown function with kinase-like domain	0.65	0.25
2	PP_2439		peroxiredoxin, alkylhydroperoxide reductase - small subunit	0.83	0.22
3	PP_2302		DNA-binding, ATP-dependent protease	0.56	0.22
4	PP_4546		ATP-dependent helicase HrpA	0.30	0.21
5	PP_2493		RadC family protein	no	0.21
6	PP_4590		conserved protein of unknown function	0.27	0.21
7	PP_5346		pyruvate carboxylase subunit B	0.29	0.20
8	PP_2475		Transcriptional regulator, TetR family	no	0.20
9	PP_5350		Transcriptional regulator, RpiR family	no	0.20
10	PP_0123		DNA polymerase I, 5	0.45	0.20
11	PP_0439		conserved protein of unknown function	0.60	0.19
12	PP_4984		Adenosylmethionine-8-amino-7-oxononanoate aminotransferase	0.46	0.19
13	PP_0125		putative cytochrome c-type protein	no	0.19
14	PP_1226		pre-queuosine 0 synthase	0.62	0.19
15	PP_0832		S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0.19	0.19
16	PP_0364		pimeloyl-[acp] methyl ester esterase	no	0.19
17	PP_4700		pantothenate synthetase	0.61	0.19
18	PP_5035		Histidine utilization repressor	0.68	0.19
19	PP_1362		pyruvate kinase II	0.62	0.19
20	PP_2820		HTH-type transcriptional regulator nfxB	no	0.18

Or look for negative cofitness