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  • Top cofit genes for PP_0496 from Pseudomonas putida KT2440

    Sodium/alanine symporter
    SEED: Probable AGCS sodium/alanine/glycine symporter
    KEGG: alanine or glycine:cation symporter, AGCS family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0498 conserved protein of unknown function no 0.46
    2 PP_0495 type 1 L-asparaginase 0.82 0.43
    3 PP_1367 formyltetrahydrofolate hydrolase 0.44 0.41
    4 PP_5337 LysR family transcriptional regulator 0.82 0.40
    5 PP_4946 sodium/L-proline transporter 0.71 0.39
    6 PP_2379 putative cytochrome oxidase biogenesis protein 0.32 0.38
    7 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I no 0.37
    8 PP_2319 conserved protein of unknown function no 0.36
    9 PP_1786 putative Glycosyl transferase no 0.36
    10 PP_4475 succinylglutamate desuccinylase 0.68 0.35
    11 PP_0594 Transcriptional regulator, TetR family no 0.35
    12 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase 0.56 0.34
    13 PP_5064 choline dehydrogenase 0.48 0.33
    14 PP_2449 conserved protein of unknown function no 0.33
    15 PP_5338 aspartate ammonia-lyase 0.78 0.32
    16 PP_0504 Outer membrane protein OprG 0.71 0.32
    17 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase no 0.32
    18 PP_3957 choline/carnitine/betaine transporter BetTC no 0.32
    19 PP_1793 Glycosyl transferase, group 2 family protein no 0.32
    20 PP_1226 pre-queuosine 0 synthase 0.54 0.32

    Or look for negative cofitness