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  • Top cofit genes for PP_0492 from Pseudomonas putida KT2440

    formate dehydrogenase formation protein
    SEED: formate dehydrogenase formation protein FdhE
    KEGG: FdhE protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4900 epoxyqueuosine reductase 0.29 0.23
    2 PP_1994 tRNA pseudouridine (38-40)synthase 0.26 0.23
    3 PP_2223 conserved protein of unknown function no 0.22
    4 PP_0123 DNA polymerase I, 5 no 0.20
    5 PP_1058 conserved protein of unknown function no 0.20
    6 PP_1808 glucose-6-phosphate isomerase 0.76 0.20
    7 PP_4004 DNA translocase FtsK 0.41 0.20
    8 PP_4803 D-alanyl-D-alanine carboxypeptidase no 0.20
    9 PP_4860 putative Mannose-6-phosphate isomerase no 0.20
    10 PP_0650 conserved protein of unknown function no 0.20
    11 PP_3760 putative methyltransferase no 0.19
    12 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.32 0.19
    13 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase no 0.19
    14 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.44 0.19
    15 PP_4879 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB no 0.19
    16 PP_0178 putative efflux pump no 0.19
    17 PP_0963 putative BolA family protein 0.72 0.19
    18 PP_0489 formate dehydrogenase-O major subunit 0.86 0.19
    19 PP_4880 exoribonuclease R 0.56 0.18
    20 PP_5721 conserved protein of unknown function no 0.18

    Or look for negative cofitness