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  • Top cofit genes for PP_0489 from Pseudomonas putida KT2440

    formate dehydrogenase-O major subunit
    KEGG: formate dehydrogenase, alpha subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.40 0.39
    2 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.38
    3 PP_4342 flagellar synthesis regulator, putative ATPase no 0.37
    4 PP_0823 Selenide, water dikinase 0.69 0.36
    5 PP_0123 DNA polymerase I, 5 no 0.35
    6 PP_4942 conserved protein of unknown function no 0.34
    7 PP_1623 RNA polymerase, sigma S (sigma 38) factor no 0.34
    8 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.30 0.33
    9 PP_4343 Flagellar biosynthesis protein FlhF no 0.33
    10 PP_4880 exoribonuclease R 0.67 0.32
    11 PP_4941 conserved exported protein of unknown function no 0.32
    12 PP_4376 flagellar filament capping protein 0.53 0.31
    13 PP_4378 flagellin, filament structural protein no 0.31
    14 PP_4008 ATP-dependent serine protease 0.77 0.31
    15 PP_3649 Transcriptional regulator, GntR family 0.27 0.31
    16 PP_1318 Cytochrome b 0.33 0.31
    17 PP_0951 Ribosome hibernation promoting factor 0.49 0.30
    18 PP_4380 Flagellar hook-associated protein FlgL no 0.30
    19 PP_0490 formate dehydrogenase-O, beta subunit 0.90 0.30
    20 PP_0494 selenocysteyl-tRNA-specific translation elongation factor 0.87 0.29

    Or look for negative cofitness