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  • Top cofit genes for PP_0488 from Pseudomonas putida KT2440

    putative NADP-dependent dehydrogenase HI_1430
    SEED: Short chain dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2257 putative aerotaxis receptor no 0.25
    2 PP_3072 Ecotin no 0.19
    3 PP_0173 putative transcriptional factor-related protein no 0.18
    4 PP_3182 GGDEF domain protein no 0.18
    5 PP_2220 C4-type zinc finger protein, DksA/TraR family no 0.17
    6 PP_4939 conserved protein of unknown function 0.62 0.17
    7 PP_1134 conserved protein of unknown function no 0.17
    8 PP_2255 C4-dicarboxylate transport protein no 0.17
    9 PP_3019 Carbon-nitrogen hydrolase family protein no 0.17
    10 PP_1154 Sensory box protein no 0.17
    11 PP_0172 ABC transporter, permease protein no 0.17
    12 PP_1956 conserved exported protein of unknown function no 0.17
    13 PP_4263 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein no 0.17
    14 PP_2861 Methyl-accepting chemotaxis transducer no 0.17
    15 PP_1609 conserved protein of unknown function no 0.17
    16 PP_0148 conserved protein of unknown function no 0.17
    17 PP_4479 arginine N-succinyltransferase, subunit beta no 0.16
    18 PP_3699 conserved protein of unknown function no 0.16
    19 PP_1189 conserved hypothetical protein no 0.16
    20 PP_2256 Transcriptional regulator, Cro/CI family no 0.16

    Or look for negative cofitness