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  • Top cofit genes for PP_0484 from Pseudomonas putida KT2440

    transporter of an unknown substrate
    SEED: Putative transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1460 putative Membrane protein 0.75 0.41
    2 PP_5310 junction-specific ATP-dependent DNA helicase 0.77 0.40
    3 PP_1202 putative enzyme involved in modification of phospholipids no 0.37
    4 PP_4824 Sensor histidine kinase/response regulator 0.69 0.34
    5 PP_4880 exoribonuclease R 0.73 0.34
    6 PP_1719 Tail-specific protease prc 0.57 0.33
    7 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.79 0.33
    8 PP_3741 transpeptidase (penicillin-binding protein 2) no 0.33
    9 PP_4124 NADH-quinone oxidoreductase subunit G 0.78 0.33
    10 PP_1201 conserved exported protein of unknown function no 0.32
    11 PP_4143 conserved protein of unknown function 0.64 0.32
    12 PP_4131 NADH-quinone oxidoreductase subunit N 0.76 0.31
    13 PP_5294 Ribonuclease PH 0.68 0.30
    14 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.81 0.30
    15 PP_1898 MotA/TolQ/ExbB proton channel family protein 0.26 0.30
    16 PP_0123 DNA polymerase I, 5 0.72 0.29
    17 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.76 0.29
    18 PP_4008 ATP-dependent serine protease 0.78 0.29
    19 PP_0951 Ribosome hibernation promoting factor 0.66 0.29
    20 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.29

    Or look for negative cofitness