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  • Top cofit genes for PP_0429 from Pseudomonas putida KT2440

    Oxidoreductase, short chain dehydrogenase/reductase family
    SEED: Oxidoreductase, short chain dehydrogenase/reductase family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.66 0.28
    2 PP_0143 conserved membrane protein of unknown function no 0.27
    3 PP_0753 putative Lipoprotein 0.37 0.26
    4 PP_4378 flagellin, filament structural protein no 0.26
    5 PP_4376 flagellar filament capping protein 0.75 0.25
    6 PP_4380 Flagellar hook-associated protein FlgL 0.68 0.25
    7 PP_3649 Transcriptional regulator, GntR family no 0.25
    8 PP_4388 Flagellar hook protein FlgE 0.72 0.23
    9 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon 0.45 0.23
    10 PP_4344 flagellar export pore protein no 0.23
    11 PP_4359 Flagellar protein FliL no 0.23
    12 PP_4396 conserved protein of unknown function 0.77 0.23
    13 PP_4361 Flagellar hook-length control protein FliK no 0.23
    14 PP_0149 conserved exported protein of unknown function 0.65 0.23
    15 PP_1318 Cytochrome b 0.30 0.23
    16 PP_4381 Flagellar hook-associated protein FlgK 0.74 0.22
    17 PP_2766 Long-chain-fatty-acid--CoA ligase-related protein no 0.22
    18 PP_4941 conserved exported protein of unknown function 0.35 0.22
    19 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.22 0.22
    20 PP_4943 putative Glycosyl transferase no 0.22

    Or look for negative cofitness