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Cofit
Protein
Homologs
Top cofit genes for PP_0400 from
Pseudomonas putida KT2440
CO2+/MG2+ efflux protein
SEED: ApaG protein
KEGG: ApaG protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_2245
Transcriptional regulator, Cro/CI family
no
0.23
2
PP
_0937
endoribonuclease G (RNAse G)
0.81
0.21
3
PP
_1186
two component system DNA-binding transcriptional dual regulator
no
0.20
4
PP
_4896
DNA mismatch repair protein MutL
0.38
0.19
5
PP
_4217
outer membrane ferripyoverdine receptor FpvA, TonB-dependent
no
0.18
6
PP
_0351
putative Transmembrane sensor protein
no
0.18
7
PP
_4944
Carbamoyltransferase
no
0.18
8
PP
_4404
dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex
no
0.18
9
PP
_0406
Nucleotidyltransferase family protein
0.77
0.17
10
PP
_5270
D-amino-acid:quinone oxidoreductase (deaminating)
0.36
0.17
11
PP
_4895
tRNA dimethylallyltransferase
0.23
0.17
12
PP
_1128
OmpA family protein
no
0.17
13
PP
_3104
conserved protein of unknown function
no
0.16
14
PP
_1076
aquaglyceroporin
0.54
0.16
15
PP
_0856
conserved lipoprotein of unknown function
0.62
0.16
16
PP
_2065
Multidrug efflux RND transporter
no
0.15
17
PP
_1803
UDP-sugar epimerase
no
0.15
18
PP
_4008
ATP-dependent serine protease
0.52
0.15
19
PP
_1764
Phosphoglycolate phosphatase 2
0.78
0.15
20
PP
_3653
Transporter, LysE family
0.31
0.15
Or look for
negative cofitness