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  • Top cofit genes for PP_0396 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG002076: hypothetical protein
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0395 putative type IV piliation protein 0.98 0.98
    2 PP_0397 protein kinase 0.98 0.98
    3 PP_0951 Ribosome hibernation promoting factor 0.69 0.69
    4 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.87 0.63
    5 PP_5502 ribosome modulation factor no 0.59
    6 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.55 0.57
    7 PP_1198 transcriptional regulator, Cro/CI family (higA antitoxin like) no 0.56
    8 PP_1318 Cytochrome b 0.56 0.55
    9 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.49 0.52
    10 PP_1778 Lipopolysaccharide ABC export system, permease protein 0.53 0.52
    11 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.50 0.50
    12 PP_1779 Lipopolysaccharide ABC export system, ATP-binding protein no 0.50
    13 PP_4471 Magnesium transporter 0.33 0.48
    14 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon no 0.48
    15 PP_4008 ATP-dependent serine protease 0.95 0.48
    16 PP_3484 Response regulator receiver protein no 0.47
    17 PP_4143 conserved protein of unknown function no 0.46
    18 PP_1058 conserved protein of unknown function 0.68 0.46
    19 PP_4375 flagellar chaperone, inhibits premature FliC assembly no 0.46
    20 PP_5041 glycogen phosphorylase 0.63 0.45

    Or look for negative cofitness