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  • Top cofit genes for PP_0381 from Pseudomonas putida KT2440

    Coenzyme PQQ synthesis protein F
    SEED: Coenzyme PQQ synthesis protein F

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0378 Pyrroloquinoline-quinone synthase 0.92 0.86
    2 PP_0376 Coenzyme PQQ synthesis protein E 0.88 0.85
    3 PP_0379 Coenzyme PQQ synthesis protein B 0.89 0.79
    4 PP_2675 Cytochrome c-type protein 0.89 0.66
    5 PP_0380 Coenzyme PQQ synthesis protein A no 0.57
    6 PP_0377 coenzyme PQQ synthesis protein D 0.79 0.57
    7 PP_2679 quinoprotein ethanol dehydrogenase 0.86 0.56
    8 PP_2667 ABC transporter 0.79 0.55
    9 PP_2665 Glycerol metabolism activator 0.82 0.54
    10 PP_2682 Fe-containing alcohol dehydrogenase 0.77 0.52
    11 PP_2669 putative Outer membrane protein 0.80 0.48
    12 PP_5538 putative ABC transporter, substrate-binding protein 0.78 0.47
    13 PP_2671 Sensor histidine kinase 0.28 0.47
    14 PP_2674 quinoprotein ethanol dehydrogenase 0.90 0.46
    15 PP_2676 putative Periplasmic binding protein 0.71 0.40
    16 PP_4565 Isocitrate dehydrogenase kinase/phosphatase 0.31 0.40
    17 PP_5097 homoserine O-acetyltransferase 0.37 0.38
    18 PP_2001 O-succinylhomoserine sulfhydrylase 0.38 0.37
    19 PP_5098 methionine biosynthesis protein MetW 0.36 0.37
    20 PP_0417 Anthranilate synthase component 1 0.40 0.36

    Or look for negative cofitness