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  • Top cofit genes for PP_0379 from Pseudomonas putida KT2440

    Coenzyme PQQ synthesis protein B
    SEED: Coenzyme PQQ synthesis protein B
    KEGG: pyrroloquinoline quinone biosynthesis protein B

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0378 Pyrroloquinoline-quinone synthase 0.91 0.86
    2 PP_0376 Coenzyme PQQ synthesis protein E 0.93 0.85
    3 PP_0381 Coenzyme PQQ synthesis protein F 0.89 0.79
    4 PP_0380 Coenzyme PQQ synthesis protein A 0.53 0.62
    5 PP_0377 coenzyme PQQ synthesis protein D 0.89 0.57
    6 PP_2675 Cytochrome c-type protein 0.89 0.54
    7 PP_2679 quinoprotein ethanol dehydrogenase 0.90 0.47
    8 PP_2665 Glycerol metabolism activator 0.78 0.46
    9 PP_2667 ABC transporter 0.79 0.45
    10 PP_2671 Sensor histidine kinase 0.65 0.44
    11 PP_2674 quinoprotein ethanol dehydrogenase 0.85 0.43
    12 PP_2669 putative Outer membrane protein 0.82 0.42
    13 PP_1444 quinoprotein glucose dehydrogenase 0.65 0.42
    14 PP_2682 Fe-containing alcohol dehydrogenase 0.63 0.41
    15 PP_5538 putative ABC transporter, substrate-binding protein 0.85 0.36
    16 PP_5097 homoserine O-acetyltransferase no 0.35
    17 PP_2001 O-succinylhomoserine sulfhydrylase no 0.35
    18 PP_2676 putative Periplasmic binding protein 0.73 0.35
    19 PP_5098 methionine biosynthesis protein MetW 0.57 0.34
    20 PP_3511 Branched-chain-amino-acid aminotransferase no 0.33

    Or look for negative cofitness