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  • Top cofit genes for PP_0368 from Pseudomonas putida KT2440

    putative Acyl-CoA dehydrogenase
    SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 1.00 0.76
    2 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.85 0.67
    3 PP_0356 malate synthase G 0.98 0.51
    4 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.86 0.50
    5 PP_4549 long-chain-fatty-acid/CoA ligase 0.84 0.50
    6 PP_4116 isocitrate lyase 0.99 0.47
    7 PP_5659 protein of unknown function no 0.47
    8 PP_2356 putative Phytochrome family protein 0.65 0.44
    9 PP_4131 NADH-quinone oxidoreductase subunit N 0.55 0.43
    10 PP_2019 adhesin-associated MmpL efflux pump (from data) 0.68 0.43
    11 PP_1941 conserved protein of unknown function no 0.42
    12 PP_5085 malic enzyme B no 0.41
    13 PP_5185 acetylglutamate kinase-like protein (regulatory domain)/amino acid N-acetyltransferase 0.45 0.40
    14 PP_0767 Transcriptional regulator, LuxR family 0.30 0.39
    15 PP_4120 NADH-quinone oxidoreductase subunit B 0.78 0.39
    16 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.68 0.39
    17 PP_2806 Transcriptional regulator, TetR family no 0.38
    18 PP_0184 Argininosuccinate lyase 0.40 0.38
    19 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.76 0.38
    20 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.51 0.38

    Or look for negative cofitness