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  • Top cofit genes for PP_0361 from Pseudomonas putida KT2440

    putative Competence protein ComF
    SEED: Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2764 FMN reductase (NADPH) no 0.23
    2 PP_5483 conserved protein of unknown function no 0.21
    3 PP_4808 23S rRNA m3psi1915 methyltransferase 0.24 0.18
    4 PP_3778 Pyrroline-5-carboxylate reductase no 0.17
    5 PP_2681 coenzyme PQQ synthesis protein D no 0.17
    6 PP_2641 Iron-sulfur cluster-binding protein no 0.17
    7 PP_2253 Transcriptional regulator, GntR family no 0.16
    8 PP_2058 putative Porin no 0.16
    9 PP_5265 Xanthine phosphoribosyltransferase 0.27 0.16
    10 PP_2838 conserved protein of unknown function 0.48 0.14
    11 PP_0227 periplasmic cystine-binding protein 0.58 0.14
    12 PP_0865 ECF subfamily RNA polymerase sigma-24 factor no 0.14
    13 PP_1230 conserved exported protein of unknown function 0.40 0.14
    14 PP_0746 Uracil phosphoribosyltransferase 0.22 0.14
    15 PP_3242 GGDEF domain protein 0.42 0.14
    16 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.13
    17 PP_3632 Transcriptional regulator, LysR family no 0.13
    18 PP_3211 ABC transporter, ATP-binding protein no 0.13
    19 PP_3570 carbohydrate-selective porin no 0.13
    20 PP_2147 conserved exported protein of unknown function 0.45 0.13

    Or look for negative cofitness