Top cofit genes for PP_0359 from Pseudomonas putida KT2440

serine/threonine protein kinase
SEED: YihE protein, required for LPS synthesis

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_5149		threonine deaminase	0.53	0.32
2	PP_3651		Sensor histidine kinase/response regulator	0.76	0.26
3	PP_t49		tRNA-Met	no	0.25
4	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	0.58	0.25
5	PP_4006		Putative arginyl-tRNA--protein transferase	0.52	0.24
6	PP_5639		conserved exported protein of unknown function	no	0.23
7	PP_4694		Glutamyl-Q tRNA(Asp) synthetase	no	0.23
8	PP_4171		conserved exported protein of unknown function	0.55	0.21
9	PP_5113		predicted Zn-dependent peptidases	no	0.21
10	PP_5217		Polyphosphate kinase	0.84	0.20
11	PP_2032		putative ATPase	no	0.19
12	PP_4785		conserved exported protein of unknown function	0.17	0.19
13	PP_5400		conserved protein of unknown function	no	0.19
14	PP_1656		ATP:GTP 3'-pyrophosphotransferase	0.55	0.19
15	PP_3342		nickel ABC transporter periplasmic binding protein	no	0.19
16	PP_2357		putative Type 1 pili protein CsuB	no	0.19
17	PP_4874		50S ribosomal protein L9	0.62	0.19
18	PP_0570		lipoprotein of unknown function	0.36	0.19
19	PP_5005		Poly(3-hydroxyalkanoate) polymerase 2	0.56	0.19
20	PP_4804		RlpA-like lipoprotein	no	0.19

Or look for negative cofitness