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  • Top cofit genes for PP_0358 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: Protein rarD
    KEGG: chloramphenicol-sensitive protein RarD

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4197 Transcriptional regulator, GntR family 0.45 0.36
    2 PP_4767 amino acid exporter for phenylalanine, threonine 0.61 0.30
    3 PP_3527 Transcriptional regulator, TetR family 0.25 0.25
    4 PP_1416 putative Tricarboxylate transport protein TctA 0.78 0.25
    5 PP_3555 putative Transmembrane sensor no 0.25
    6 PP_2210 LysR family transcriptional regulator no 0.18
    7 PP_1417 putative Tricarboxylate transport protein TctB 0.44 0.18
    8 PP_1736 conserved protein of unknown function no 0.18
    9 PP_3054 Pyocin R2_PP, baseplate/tail fiber protein 0.75 0.18
    10 PP_0185 Positive alginate biosynthesis regulatory protein no 0.17
    11 PP_3831 conserved protein of unknown function 0.45 0.17
    12 PP_3503 Sigma-54 dependent transcriptional regulator no 0.16
    13 PP_4824 Sensor histidine kinase/response regulator no 0.16
    14 PP_4958 putative metal-dependent hydrolase 0.33 0.16
    15 PP_0663 Transcriptional regulator, AsnC family no 0.15
    16 PP_4011 isocitrate dehydrogenase, NADP(+)-specific no 0.15
    17 PP_4520 conserved protein of unknown function 0.51 0.15
    18 PP_1096 putative electron transport complex protein no 0.15
    19 PP_0063 putative Lipid A biosynthesis lauroyl acyltransferase 0.68 0.15
    20 PP_3770 conserved protein of unknown function no 0.15

    Or look for negative cofitness