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  • Top cofit genes for PP_0356 from Pseudomonas putida KT2440

    malate synthase G
    SEED: Malate synthase G (EC 2.3.3.9)
    KEGG: malate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4116 isocitrate lyase 0.99 0.91
    2 PP_5659 protein of unknown function no 0.85
    3 PP_5085 malic enzyme B 0.72 0.66
    4 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.97 0.56
    5 PP_0248 Probable alpha-L-glutamate ligase 0.68 0.55
    6 PP_4549 long-chain-fatty-acid/CoA ligase 0.77 0.53
    7 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.47 0.53
    8 PP_0368 putative Acyl-CoA dehydrogenase 0.98 0.52
    9 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.69 0.49
    10 PP_2356 putative Phytochrome family protein no 0.44
    11 PP_0370 Acyl-CoA dehydrogenase family protein 0.66 0.44
    12 PP_4565 Isocitrate dehydrogenase kinase/phosphatase 0.99 0.44
    13 PP_4550 long-chain-fatty-acid/CoA ligase no 0.43
    14 PP_1941 conserved protein of unknown function no 0.41
    15 PP_2868 Transcriptional regulator, Cro/CI family no 0.40
    16 PP_0767 Transcriptional regulator, LuxR family no 0.40
    17 PP_5128 Dihydroxy-acid dehydratase 0.65 0.37
    18 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.67 0.37
    19 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.58 0.36
    20 PP_2675 Cytochrome c-type protein 0.59 0.36

    Or look for negative cofitness