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Cofit
Protein
Homologs
Top cofit genes for PP_0329 from
Pseudomonas putida KT2440
conserved protein of unknown function
SEED: YD repeat protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1588
N-succinyl-L,L-diaminopimelate aminotransferase alternative
no
0.19
2
PP
_1239
Metallo-beta-lactamase family protein
no
0.18
3
PP
_0046
tyrosine-specific outer membrane porin D
no
0.17
4
PP
_0646
conserved protein of unknown function
no
0.17
5
PP
_1927
putative Arsenical resistance protein ArsH
no
0.17
6
PP
_1110
serine acetyltransferase
no
0.16
7
PP
_2602
putative 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase
no
0.16
8
PP
_0333
conserved exported protein of unknown function
no
0.16
9
PP
_4723
Carbamoyl-phosphate synthase large chain
no
0.16
10
PP
_2288
Phage tail fiber protein
no
0.16
11
PP
_2287
Phage internal core protein
no
0.16
12
PP
_1109
Transcriptional regulator, GntR family
no
0.15
13
PP
_4724
Carbamoyl-phosphate synthase small chain
no
0.15
14
PP
_0286
adenine glycosylase
no
0.15
15
PP
_3443
putative glyceraldehyde-3-phosphate dehydrogenase
no
0.15
16
PP
_0037
porin P
no
0.15
17
PP
_1111
putative Synthetase
no
0.15
18
PP
_5147
Hydrolase, haloacid dehalogenase-like family
no
0.15
19
PP
_2478
putative Isoquinoline 1-oxidoreductase, beta subunit
no
0.14
20
PP
_0026
putative cobalt/cadmium/zinc exporter
no
0.14
Or look for
negative cofitness