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  • Top cofit genes for PP_0329 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: YD repeat protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1588 N-succinyl-L,L-diaminopimelate aminotransferase alternative no 0.19
    2 PP_1239 Metallo-beta-lactamase family protein no 0.18
    3 PP_0046 tyrosine-specific outer membrane porin D no 0.17
    4 PP_0646 conserved protein of unknown function no 0.17
    5 PP_1927 putative Arsenical resistance protein ArsH no 0.17
    6 PP_1110 serine acetyltransferase no 0.16
    7 PP_2602 putative 4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase no 0.16
    8 PP_0333 conserved exported protein of unknown function no 0.16
    9 PP_4723 Carbamoyl-phosphate synthase large chain no 0.16
    10 PP_2288 Phage tail fiber protein no 0.16
    11 PP_2287 Phage internal core protein no 0.16
    12 PP_1109 Transcriptional regulator, GntR family no 0.15
    13 PP_4724 Carbamoyl-phosphate synthase small chain no 0.15
    14 PP_0286 adenine glycosylase no 0.15
    15 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.15
    16 PP_0037 porin P no 0.15
    17 PP_1111 putative Synthetase no 0.15
    18 PP_5147 Hydrolase, haloacid dehalogenase-like family no 0.15
    19 PP_2478 putative Isoquinoline 1-oxidoreductase, beta subunit no 0.14
    20 PP_0026 putative cobalt/cadmium/zinc exporter no 0.14

    Or look for negative cofitness