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  • Top cofit genes for PP_0300 from Pseudomonas putida KT2440

    putative metallopeptidase
    SEED: Peptidyl-Asp metalloendopeptidase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4171 conserved exported protein of unknown function no 0.22
    2 PP_1781 putative O-acyltransferase no 0.22
    3 PP_4100 Transcriptional regulator, Cro/CI family no 0.20
    4 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.35 0.19
    5 PP_5275 putative regulator no 0.19
    6 PP_0574 DNA-binding response regulator, LuxR family no 0.19
    7 PP_0725 conserved hypothetical TPR repeat protein no 0.19
    8 PP_4041 putative glycoside hydrolase no 0.19
    9 PP_1204 putative Lipoprotein no 0.18
    10 PP_2184 putative Formate dehydrogenase, beta subunit no 0.18
    11 PP_1113 Pyridoxal-phosphate dependent enzyme family protein no 0.18
    12 PP_0348 conserved protein of unknown function no 0.18
    13 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.18
    14 PP_2146 helicase SNF2/RAD54 family no 0.17
    15 PP_1627 conserved protein of unknown function no 0.17
    16 PP_1883 protein of unknown function no 0.17
    17 PP_0066 Ribosomal RNA small subunit methyltransferase B no 0.17
    18 PP_2611 membrane protein of unknown function no 0.17
    19 PP_1871 Protease HtpX no 0.17
    20 PP_1798 Outer membrane efflux protein no 0.17

    Or look for negative cofitness