Top cofit genes for PP_0298 from Pseudomonas putida KT2440

AraC-family transcriptional regulator
SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0315		putative glycine-betaine dioxygenase subunit	0.92	0.57
2	PP_0322		serine hydroxymethyltransferase	0.92	0.45
3	PP_0316		putative glycine-betaine dioxygenase subunit	0.90	0.45
4	PP_0323		sarcosine oxidase subunit beta	0.91	0.44
5	PP_0325		sarcosine oxidase subunit alpha	0.93	0.42
6	PP_0309		conserved protein of unknown function	0.92	0.42
7	PP_0295		choline / betaine / carnitine ABC transporter - membrane subunit	0.90	0.42
8	PP_0294		Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data)	0.91	0.40
9	PP_0302		L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data)	0.90	0.39
10	PP_0324		sarcosine oxidase subunit delta	0.88	0.38
11	PP_0304		Carnitine uptake ABC transporter, periplasmic component	0.86	0.34
12	PP_0308		putative dipeptidase	0.91	0.34
13	PP_0301		betainyl-CoA thiolase	0.88	0.32
14	PP_5441		protein of unknown function	no	0.32
15	PP_0296		choline / betaine / carnitine ABC transporter - substrate binding protein	0.89	0.31
16	PP_0326		sarcosine oxidase subunit gamma	0.87	0.30
17	PP_0310		putative dimethylglycine dehydrogenase subunit	0.91	0.26
18	PP_0305		HTH-type transcriptional regulator CdhR	0.82	0.24
19	PP_0303		dehydrocarnitine cleavage enzyme	0.88	0.22
20	PP_0312		electron transfer flavoprotein, alpha subunit	0.89	0.21

Or look for negative cofitness