Top cofit genes for PP_0296 from Pseudomonas putida KT2440

choline / betaine / carnitine ABC transporter - substrate binding protein
SEED: L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1)
KEGG: glycine betaine/proline transport system substrate-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 PP_0295 choline / betaine / carnitine ABC transporter - membrane subunit 0.95 0.33
2 PP_0316 putative glycine-betaine dioxygenase subunit 0.95 0.32
3 PP_0298 AraC-family transcriptional regulator 0.89 0.31
4 PP_0315 putative glycine-betaine dioxygenase subunit 0.95 0.31
5 PP_0302 L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) 0.89 0.30
6 PP_0294 Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data) 0.94 0.28
7 PP_0322 serine hydroxymethyltransferase 0.94 0.26
8 PP_0309 conserved protein of unknown function 0.92 0.25
9 PP_0304 Carnitine uptake ABC transporter, periplasmic component 0.89 0.24
10 PP_0301 betainyl-CoA thiolase 0.86 0.24
11 PP_0303 dehydrocarnitine cleavage enzyme 0.83 0.23
12 PP_0323 sarcosine oxidase subunit beta 0.94 0.22
13 PP_0325 sarcosine oxidase subunit alpha 0.96 0.22
14 PP_0308 putative dipeptidase 0.92 0.21
15 PP_0324 sarcosine oxidase subunit delta 0.93 0.20
16 PP_0310 putative dimethylglycine dehydrogenase subunit 0.94 0.20
17 PP_0326 sarcosine oxidase subunit gamma 0.90 0.19
18 PP_4461 Major facilitator family transporter no 0.16
19 PP_0312 electron transfer flavoprotein, alpha subunit 0.91 0.16
20 PP_4421 putative aminotransferase no 0.16

Or look for negative cofitness