Top cofit genes for PP_0294 from Pseudomonas putida KT2440

Choline / carnitine / glycine betaine ABC transporter, ATPase component (from data)
Original annotation: choline / betaine / carnitine ABC transporter - ATP binding subunit
SEED: L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)
KEGG: glycine betaine/proline transport system ATP-binding protein

Rank Hit Name Description Conserved? Cofitness  
1 PP_0315 putative glycine-betaine dioxygenase subunit 0.95 0.43
2 PP_0298 AraC-family transcriptional regulator 0.91 0.40
3 PP_0316 putative glycine-betaine dioxygenase subunit 0.94 0.39
4 PP_0295 choline / betaine / carnitine ABC transporter - membrane subunit 0.94 0.35
5 PP_0302 L-carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) 0.80 0.33
6 PP_0309 conserved protein of unknown function 0.93 0.31
7 PP_0323 sarcosine oxidase subunit beta 0.95 0.29
8 PP_0322 serine hydroxymethyltransferase 0.94 0.29
9 PP_0325 sarcosine oxidase subunit alpha 0.96 0.29
10 PP_0296 choline / betaine / carnitine ABC transporter - substrate binding protein 0.94 0.28
11 PP_0308 putative dipeptidase 0.93 0.28
12 PP_0301 betainyl-CoA thiolase 0.83 0.27
13 PP_0324 sarcosine oxidase subunit delta 0.92 0.26
14 PP_0304 Carnitine uptake ABC transporter, periplasmic component 0.78 0.25
15 PP_0310 putative dimethylglycine dehydrogenase subunit 0.93 0.19
16 PP_0312 electron transfer flavoprotein, alpha subunit 0.92 0.19
17 PP_5441 protein of unknown function no 0.18
18 PP_0326 sarcosine oxidase subunit gamma 0.92 0.18
19 PP_0311 putative dimethylglycine dehydrogenase subunit 0.93 0.18
20 PP_0016 conserved hypothetical protein no 0.17

Or look for negative cofitness