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  • Top cofit genes for PP_0288 from Pseudomonas putida KT2440

    putative Oxalate/formate antiporter
    SEED: MFS permease

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_t49 tRNA-Met no 0.23
    2 PP_0053 putative sulfide:quinone oxidoreductase 0.72 0.23
    3 PP_2413 GGDEF family protein 0.33 0.22
    4 PP_1411 GGDEF domain protein no 0.22
    5 PP_4246 Periplasmic binding protein no 0.19
    6 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.19
    7 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.24 0.19
    8 PP_4781 Sensor histidine kinase no 0.18
    9 PP_0066 Ribosomal RNA small subunit methyltransferase B no 0.18
    10 PP_0573 conserved protein of unknown function 0.77 0.17
    11 PP_3990 substrate or modulator of FtsH-mediated proteolysis no 0.17
    12 PP_1494 Response regulator/GGDEF domain protein no 0.17
    13 PP_1492 Sensor histidine kinase/response regulator no 0.17
    14 PP_0672 Sensory box protein 0.45 0.17
    15 PP_4171 conserved exported protein of unknown function 0.45 0.16
    16 PP_4100 Transcriptional regulator, Cro/CI family no 0.16
    17 PP_0725 conserved hypothetical TPR repeat protein no 0.16
    18 PP_5136 ABC transporter, permease protein 0.67 0.16
    19 PP_5424 conserved protein of unknown function no 0.15
    20 PP_4405 Sensory box protein no 0.15

    Or look for negative cofitness