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  • Top cofit genes for PP_0281 from Pseudomonas putida KT2440

    Amino acid ABC transporter, permease protein
    SEED: Arginine ABC transporter, permease protein ArtQ

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4162 conserved membrane protein of unknown function 0.26 0.33
    2 PP_0280 Amino acid ABC transporter, permease protein 0.94 0.30
    3 PP_0282 L-arginine ABC transporter - periplasmic binding subunit 0.88 0.28
    4 PP_2210 LysR family transcriptional regulator no 0.23
    5 PP_3073 3-hydroxybutyrate dehydrogenase no 0.23
    6 PP_2971 transposase no 0.22
    7 PP_3717 Transcriptional regulator, LuxR family no 0.22
    8 PP_4513 conserved protein of unknown function 0.32 0.22
    9 PP_2542 Transcriptional regulator, GntR family no 0.22
    10 PP_2556 Chromate transporter no 0.22
    11 PP_1867 conserved protein of unknown function no 0.21
    12 PP_4215 pyoverdine biosynthesis related protein no 0.21
    13 PP_4207 conserved protein of unknown function no 0.21
    14 PP_2994 Oxidoreductase, FMN-binding no 0.21
    15 PP_2979 conserved protein of unknown function no 0.21
    16 PP_2567 Hydrolase, alpha/beta fold family no 0.21
    17 PP_3551 DNA-binding response regulator, LuxR family 0.35 0.21
    18 PP_1302 putative metal-binding hydrolase-oxidase enzyme 0.34 0.20
    19 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA no 0.20
    20 PP_3722 Alanine racemase no 0.20

    Or look for negative cofitness