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  • Top cofit genes for PP_0268 from Pseudomonas putida KT2440

    outer-membrane porin D
    SEED: Outer membrane porin, OprD family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4700 pantothenate synthetase no 0.21
    2 PP_1185 Outer membrane protein H1 0.36 0.20
    3 PP_2000 amidophosphoribosyl transferase no 0.20
    4 PP_2386 conserved protein of unknown function no 0.19
    5 PP_4693 RNA polymerase-binding transcription factor DksA no 0.19
    6 PP_1370 Glycosyl transferase, group 1 family protein no 0.19
    7 PP_4451 conserved protein of unknown function no 0.19
    8 PP_2507 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.18
    9 PP_2083 putative Lipase 0.31 0.18
    10 PP_1582 conserved protein of unknown function no 0.17
    11 PP_3754 Beta-ketothiolase BktB no 0.17
    12 PP_2639 4-hydroxy-tetrahydrodipicolinate synthase no 0.17
    13 PP_3554 Acyl-CoA dehydrogenase family protein no 0.16
    14 PP_0234 outer-membrane porin E 0.55 0.16
    15 PP_2084 Putative regulator of ribonuclease activity 0.29 0.16
    16 PP_1664 phosphoribosylglycinamide formyltransferase 1 no 0.16
    17 PP_2302 DNA-binding, ATP-dependent protease 0.45 0.15
    18 PP_0082 tryptophan synthase alpha chain 0.59 0.15
    19 PP_3553 AMP-binding domain protein no 0.15
    20 PP_2087 CmpX protein no 0.15

    Or look for negative cofitness