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  • Top cofit genes for PP_0264 from Pseudomonas putida KT2440

    Sensor histidine kinase
    SEED: Signal transduction histidine kinase regulating C4-dicarboxylate transport system
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0263 C4-dicarboxylate transport transcriptional regulatory protein 0.91 0.42
    2 PP_1188 C4-dicarboxylate transport protein 0.94 0.31
    3 PP_0806 putative Surface adhesion protein no 0.24
    4 PP_0805 Outer membrane efflux protein no 0.24
    5 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein no 0.24
    6 PP_4904 Flagellar motor rotation protein no 0.22
    7 PP_4391 flagellar basal-body rod protein FlgB 0.14 0.22
    8 PP_1623 RNA polymerase, sigma S (sigma 38) factor 0.44 0.22
    9 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.18 0.22
    10 PP_3907 conserved protein of unknown function no 0.22
    11 PP_2971 transposase no 0.21
    12 PP_0355 Response regulator no 0.21
    13 PP_4382 Peptidoglycan hydrolase FlgJ no 0.21
    14 PP_4390 flagellar basal-body rod protein FlgC no 0.21
    15 PP_4378 flagellin, filament structural protein no 0.21
    16 PP_1087 Outer membrane protein, OmpA family no 0.21
    17 PP_4386 flagellar basal-body rod protein FlgF no 0.21
    18 PP_4380 Flagellar hook-associated protein FlgL 0.16 0.21
    19 PP_3556 conserved membrane protein of unknown function 0.39 0.21
    20 PP_4369 Flagellar M-ring protein no 0.21

    Or look for negative cofitness