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  • Top cofit genes for PP_0263 from Pseudomonas putida KT2440

    C4-dicarboxylate transport transcriptional regulatory protein
    SEED: C4-dicarboxylate transport transcriptional regulatory protein
    KEGG: two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1188 C4-dicarboxylate transport protein 0.99 0.52
    2 PP_0264 Sensor histidine kinase 0.91 0.42
    3 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.31 0.19
    4 PP_1420 Transcriptional regulatory protein tctD no 0.16
    5 PP_1321 ClpXP protease specificity-enhancing factor 0.49 0.15
    6 PP_1421 putative Sensor histidine kinase TctE no 0.15
    7 PP_1418 putative Tricarboxylate transport protein TctC no 0.15
    8 PP_0806 putative Surface adhesion protein no 0.15
    9 PP_0805 Outer membrane efflux protein no 0.15
    10 PP_2389 conserved protein of unknown function no 0.15
    11 PP_4849 putative DnaK protein no 0.14
    12 PP_2144 Transcriptional regulator, TetR family 0.40 0.14
    13 PP_5054 glutaredoxin 3 no 0.14
    14 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.48 0.14
    15 PP_1126 putative Hydrolase no 0.14
    16 PP_0147 Citrate transporter no 0.14
    17 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.23 0.14
    18 PP_4803 D-alanyl-D-alanine carboxypeptidase no 0.13
    19 PP_0135 conserved exported protein of unknown function no 0.13
    20 PP_0574 DNA-binding response regulator, LuxR family no 0.13

    Or look for negative cofitness