Top cofit genes for PP_0248 from Pseudomonas putida KT2440

Probable alpha-L-glutamate ligase
SEED: Ribosomal protein S6 glutaminyl transferase
KEGG: ribosomal protein S6 modification protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4116		isocitrate lyase	0.69	0.60
2	PP_0356		malate synthase G	0.68	0.55
3	PP_5659		protein of unknown function	no	0.54
4	PP_5085		malic enzyme B	0.43	0.46
5	PP_4565		Isocitrate dehydrogenase kinase/phosphatase	0.76	0.43
6	PP_1941		conserved protein of unknown function	no	0.42
7	PP_0767		Transcriptional regulator, LuxR family	no	0.40
8	PP_2433		conserved protein of unknown function	no	0.38
9	PP_2868		Transcriptional regulator, Cro/CI family	no	0.34
10	PP_4549		long-chain-fatty-acid/CoA ligase	0.79	0.34
11	PP_0370		Acyl-CoA dehydrogenase family protein	0.32	0.33
12	PP_0368		putative Acyl-CoA dehydrogenase	0.19	0.33
13	PP_0763		Medium-chain-fatty-acid CoA ligase	0.37	0.32
14	PP_3925		conserved protein of unknown function	0.50	0.32
15	PP_2137		beta-ketoadipyl CoA thiolase, beta component	no	0.31
16	PP_4550		long-chain-fatty-acid/CoA ligase	no	0.30
17	PP_0413		Polyamine ABC transporter, permease protein	no	0.30
18	PP_2018		adhesin-associated BNR repeat protein (from data)	no	0.30
19	PP_4699		3-methyl-2-oxobutanoate hydroxymethyltransferase	0.54	0.30
20	PP_2136		enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase	0.74	0.29

Or look for negative cofitness