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  • Top cofit genes for PP_0245 from Pseudomonas putida KT2440

    putative transcriptional accessory protein
    SEED: Transcription accessory protein (S1 RNA-binding domain)
    KEGG: uncharacterized protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.41
    2 PP_0540 conserved inner membrane protein 0.59 0.41
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.77 0.40
    4 PP_1798 Outer membrane efflux protein no 0.40
    5 PP_1797 HlyD family secretion protein no 0.37
    6 PP_5283 periplasmic dipeptide transport protein 0.54 0.36
    7 PP_3627 conserved protein of unknown function no 0.36
    8 PP_5284 UPF0758 protein PP_5284 0.33 0.34
    9 PP_4171 conserved exported protein of unknown function 0.74 0.34
    10 PP_2148 transcription-repair coupling factor 0.64 0.32
    11 PP_1663 conserved exported protein of unknown function no 0.32
    12 PP_1871 Protease HtpX 0.85 0.31
    13 PP_5058 Carboxy-terminal-processing protease 0.48 0.30
    14 PP_1774 conserved exported protein of unknown function no 0.30
    15 PP_1777 phosphomannomutase 0.35 0.30
    16 PP_1075 glycerol kinase 0.57 0.30
    17 PP_1803 UDP-sugar epimerase no 0.29
    18 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent 0.74 0.29
    19 PP_1626 DNA mismatch repair protein MutS 0.79 0.29
    20 PP_t49 tRNA-Met no 0.29

    Or look for negative cofitness