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  • Top cofit genes for PP_0239 from Pseudomonas putida KT2440

    aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate
    SEED: Alkanesulfonates transport system permease protein
    KEGG: sulfonate/nitrate/taurine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4224 Sensor histidine kinase no 0.18
    2 PP_4303 conserved protein of unknown function no 0.16
    3 PP_0069 putative Rossmann fold nucleotide-binding protein no 0.15
    4 PP_0300 putative metallopeptidase no 0.15
    5 PP_2457 DNA-binding transcriptional repressor no 0.15
    6 PP_3153 conserved exported protein of unknown function no 0.14
    7 PP_2710 conserved protein of unknown function 0.13 0.14
    8 PP_4770 conserved protein of unknown function 0.19 0.13
    9 PP_3974 Transcriptional regulator, LysR family no 0.13
    10 PP_5068 conserved protein of unknown function, UPF0061 family 0.52 0.13
    11 PP_3155 putative Outer membrane ferric siderophore receptor no 0.13
    12 PP_1890 Type 1 pili chaperone protein FimC 0.32 0.12
    13 PP_1654 cysteine synthase B 0.26 0.12
    14 PP_2715 ArsH protein 0.31 0.12
    15 PP_1853 Transcriptional regulator, LysR family no 0.12
    16 PP_2747 conserved protein of unknown function 0.11 0.12
    17 PP_2025 Exonuclease SbcD 0.23 0.12
    18 PP_4240 putative Microcin b17 processing protein mcbd no 0.12
    19 PP_5343 putative Transcriptional regulator no 0.12
    20 PP_2768 putative Branched-chain amino acid ABC transporter, permease protein no 0.12

    Or look for negative cofitness