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  • Top cofit genes for PP_0225 from Pseudomonas putida KT2440

    sulfur compound ABC transporter - ATP-binding subunit
    SEED: Cystine ABC transporter, ATP-binding protein
    KEGG: cystine transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4950 conserved protein of unknown function 0.21 0.20
    2 PP_0226 sulfur compound ABC transporter - permease subunit 0.84 0.19
    3 PP_1970 putative Lipoprotein no 0.19
    4 PP_3169 conserved membrane protein of unknown function no 0.19
    5 PP_2027 conserved exported protein of unknown function no 0.18
    6 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat no 0.18
    7 PP_4276 Chromosome partition protein Smc 0.24 0.18
    8 PP_1279 Probable alginate O-acetylase AlgJ no 0.17
    9 PP_2376 Esterified fatty acid cis/trans isomerase 0.14 0.17
    10 PP_4669 OmpA family protein no 0.17
    11 PP_0227 periplasmic cystine-binding protein 0.89 0.17
    12 PP_3425 Efflux transporter RND family, MFP subunit no 0.17
    13 PP_3613 L-sorbosone dehydrogenase 0.31 0.17
    14 PP_2631 putative cellulose biosynthesis, BcsF/YhjT no 0.16
    15 PP_3733 putative ABC transporter lipoprotein 0.33 0.16
    16 PP_5023 Amino acid ABC transporter, permease protein no 0.16
    17 PP_1893 medium-long chain acyl-CoA dehydrogenase no 0.16
    18 PP_1813 ComEA-related protein no 0.16
    19 PP_3609 conserved membrane protein of unknown function no 0.16
    20 PP_3098 conserved protein of unknown function no 0.16

    Or look for negative cofitness