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  • Top cofit genes for PP_0208 from Pseudomonas putida KT2440

    putative Nitrate ABC transporter, permease protein
    KEGG: sulfonate/nitrate/taurine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_t29 tRNA-Ala no 0.25
    2 PP_2025 Exonuclease SbcD no 0.25
    3 PP_2043 conserved exported protein of unknown function no 0.25
    4 PP_3256 Glycosyl transferase, group 2 family protein no 0.24
    5 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) no 0.24
    6 PP_2210 LysR family transcriptional regulator no 0.24
    7 PP_2566 conserved protein of unknown function containing Leucine-rich repeat domain no 0.23
    8 PP_2764 FMN reductase (NADPH) no 0.22
    9 PP_0994 putative RNA polymerase sigma factor no 0.21
    10 PP_2034 conserved membrane protein of unknown function no 0.21
    11 PP_1707 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.21
    12 PP_0355 Response regulator no 0.21
    13 PP_2036 putative 4-hydroxy-tetrahydrodipicolinate synthase 0.19 0.21
    14 PP_2832 galactose-binding protein regulator no 0.21
    15 PP_2040 Major facilitator family transporter no 0.21
    16 PP_1504 conserved protein of unknown function no 0.21
    17 PP_3624 conserved exported protein of unknown function no 0.20
    18 PP_0207 putative Nitrate ABC transporter, periplasmic nitrate-binding protein no 0.20
    19 PP_3088 conserved protein of unknown function no 0.20
    20 PP_0348 conserved protein of unknown function no 0.20

    Or look for negative cofitness