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  • Top cofit genes for PP_0204 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Putative alkanesulfonate metabolism utilization regulator
    KEGG: GntR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5497 conserved protein of unknown function with rhs repeat-associated core domain no 0.19
    2 PP_1500 putative Lipoprotein 0.30 0.19
    3 PP_2438 putative alcaline-induced transporter no 0.17
    4 PP_2452 conserved protein of unknown function no 0.16
    5 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat no 0.16
    6 PP_0625 Chaperone protein ClpB no 0.16
    7 PP_3888 conserved protein of unknown function no 0.15
    8 PP_2065 Multidrug efflux RND transporter no 0.15
    9 PP_1253 Transcriptional regulator, ArsR family no 0.15
    10 PP_3222 ABC transporter, permease protein no 0.15
    11 PP_4106 gamma-aminobutyrate permease no 0.15
    12 PP_1847 putative TonB-dependent ferric siderophore receptor no 0.14
    13 PP_2524 HD domain protein no 0.14
    14 PP_2299 Trigger factor no 0.14
    15 PP_0249 conserved protein of unknown function no 0.14
    16 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.14
    17 PP_2434 conserved protein of unknown function no 0.14
    18 PP_1186 two component system DNA-binding transcriptional dual regulator no 0.14
    19 PP_2414 conserved exported protein of unknown function no 0.14
    20 PP_2643 aromatic acid chemoreceptor no 0.14

    Or look for negative cofitness