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  • Top cofit genes for PP_0199 from Pseudomonas putida KT2440

    putative membrane protease family, stomatin
    SEED: Putative stomatin/prohibitin-family membrane protease subunit aq_911

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1022 glucose 6-phosphate-1-dehydrogenase no 0.16
    2 PP_3496 Endoribonuclease L-PSP no 0.15
    3 PP_3602 2,5-dioxovalerate dehydrogenase no 0.15
    4 PP_4205 mRNA interferase MqsR of the MqsA-MqsR antitoxin/toxin complex and DNA-binding transcriptional repressor 0.29 0.15
    5 PP_3651 Sensor histidine kinase/response regulator no 0.14
    6 PP_1013 Sensor histidine kinase no 0.14
    7 PP_1362 pyruvate kinase II no 0.14
    8 PP_4479 arginine N-succinyltransferase, subunit beta 0.45 0.14
    9 PP_0114 methionine ABC transporter ATP-binding protein no 0.14
    10 PP_0591 Adenine deaminase no 0.14
    11 PP_1011 glucokinase no 0.13
    12 PP_3034 putative Regulator protein no 0.13
    13 PP_4277 Transcriptional regulator, GntR family no 0.13
    14 PP_3260 DNA ligase D no 0.13
    15 PP_0407 DnaJ-like protein DjlA 0.35 0.13
    16 PP_4845 putative Urea ABC transporter, ATP-binding protein no 0.13
    17 PP_5716 conserved protein of unknown function no 0.12
    18 PP_3481 conserved exported protein of unknown function 0.22 0.12
    19 PP_3377 2-ketogluconate transporter, putative no 0.12
    20 PP_2738 putative Transcriptional regulator no 0.12

    Or look for negative cofitness