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  • Top cofit genes for PP_0176 from Pseudomonas putida KT2440

    putative efflux transporter
    SEED: Inner membrane component of tripartite multidrug resistance system

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0179 putative efflux transporter 0.93 0.69
    2 PP_0178 putative efflux pump 0.93 0.66
    3 PP_0177 conserved protein of unknown function 0.92 0.51
    4 PP_3656 putative Aromatic compound-specific porin no 0.37
    5 PP_1968 TetR family transcriptional regulator no 0.33
    6 PP_3658 putative Aromatic compound MFS transporter no 0.32
    7 PP_3657 P-nitrobenzoate reductase NfnB no 0.26
    8 PP_3659 transcriptional regulator, AraC family no 0.25
    9 PP_0859 putative ketoglutaramate omega-amidase 0.57 0.23
    10 PP_2437 putative Acyl-CoA dehydrogenase 0.46 0.22
    11 PP_3272 acetate permease no 0.21
    12 PP_3285 detoxifying thioesterase of the phenylacetate degradation pathway no 0.20
    13 PP_3282 3-hydroxyadipyl-CoA dehydrogenase no 0.20
    14 PP_2048 putative acyl-CoA dehydrogenase no 0.20
    15 PP_4785 conserved exported protein of unknown function 0.51 0.19
    16 PP_1151 conserved protein of unknown function no 0.19
    17 PP_3270 oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase no 0.18
    18 PP_5706 Sec translocation complex - SecG subunit 0.49 0.18
    19 PP_1150 putative Membrane protein no 0.18
    20 PP_4804 RlpA-like lipoprotein 0.53 0.17

    Or look for negative cofitness