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  • Top cofit genes for PP_0170 from Pseudomonas putida KT2440

    ABC transporter, periplasmic binding protein
    SEED: Taurine-binding periplasmic protein TauA
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5639 conserved exported protein of unknown function no 0.23
    2 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily no 0.23
    3 PP_0924 conserved protein of unknown function no 0.21
    4 PP_0182 conserved protein of unknown function no 0.21
    5 PP_4804 RlpA-like lipoprotein 0.61 0.20
    6 PP_4696 Nitrogen regulation protein NR(I) no 0.20
    7 PP_2657 phosphate ABC transporter 0.35 0.19
    8 PP_3421 Sensor histidine kinase no 0.19
    9 PP_0337 Sensory box protein 0.49 0.19
    10 PP_2933 GSH-dependent disulfide bond oxidoreductase no 0.19
    11 PP_5351 glucose-6-phosphate 1-dehydrogenase no 0.19
    12 PP_2267 putative Phage single-stranded DNA-binding protein no 0.18
    13 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.66 0.17
    14 PP_4925 conserved protein of unknown function no 0.17
    15 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.31 0.17
    16 PP_1118 Recombinase-related protein no 0.17
    17 PP_5543 protein of unknown function no 0.17
    18 PP_4830 precorrin-6Y C(5,15)-methyltransferase 0.26 0.17
    19 PP_2661 conserved protein of unknown function no 0.17
    20 PP_3635 putative Sulfonate ABC transporter, permease protein no 0.17

    Or look for negative cofitness