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  • Top cofit genes for PP_0158 from Pseudomonas putida KT2440

    glutaryl-CoA dehydrogenase
    SEED: Glutaryl-CoA dehydrogenase (EC 1.3.99.7)
    KEGG: glutaryl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0159 putative CoA-transferase family III 0.97 0.59
    2 PP_0157 transcriptional activator of gcdH, LysR family 0.94 0.45
    3 PP_2910 L-2-hydroxyglutarate oxidase no 0.35
    4 PP_3681 putative Helicase no 0.30
    5 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) 0.56 0.29
    6 PP_0160 putative ferrioxamine receptor 0.31 0.27
    7 PP_1945 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase no 0.27
    8 PP_0154 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) 0.62 0.27
    9 PP_1952 Metallo-beta-lactamase family protein no 0.25
    10 PP_1937 putative helicase no 0.25
    11 PP_3680 conserved protein of unknown function 0.63 0.24
    12 PP_1948 Benzaldehyde dehydrogenase no 0.24
    13 PP_0481 Catalase 0.24 0.23
    14 PP_1940 Methyl-accepting chemotaxis transducer no 0.23
    15 PP_2660 conserved protein of unknown function no 0.23
    16 PP_1954 conserved protein of unknown function no 0.23
    17 PP_5611 putative transcriptional regulator no 0.22
    18 PP_4429 Transcriptional regulator, GntR family 0.50 0.22
    19 PP_0155 pyridine nucleotide transhydrogenase, beta subunit no 0.22
    20 PP_4458 putative Opine ABC transporter, periplasmic binding protein no 0.22

    Or look for negative cofitness