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Cofit
Protein
Homologs
Top cofit genes for PP_0146 from
Pseudomonas putida KT2440
putative transport protein
SEED: Integral membrane protein TerC
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0137
glutamate/aspartate-proton DAACS transporter
0.37
0.42
2
PP
_1067
Sensor histidine kinase
0.38
0.38
3
PP
_1071
glutamate / aspartate ABC transporter - periplasmic binding protein
0.44
0.33
4
PP
_1066
C4-dicarboxylate transport transcriptional regulatory protein
no
0.30
5
PP
_1800
Oxidoreductase Rmd
no
0.25
6
PP
_1803
UDP-sugar epimerase
0.42
0.25
7
PP
_3680
conserved protein of unknown function
no
0.24
8
PP
_1780
putative mannosyltransferase
no
0.24
9
PP
_1805
Polysaccharide biosynthesis protein
no
0.24
10
PP
_1799
GDP-mannose 4,6-dehydratase
no
0.23
11
PP
_1804
Glycosyl transferase WbpL
no
0.23
12
PP
_1802
glycosyl transferase
no
0.23
13
PP
_1801
Glycosyl transferase WbpY
no
0.23
14
PP
_0937
endoribonuclease G (RNAse G)
0.20
0.23
15
PP
_1791
putative Aldolase/synthase
no
0.23
16
PP
_4162
conserved membrane protein of unknown function
0.88
0.22
17
PP
_0594
Transcriptional regulator, TetR family
0.62
0.22
18
PP
_1776
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase
no
0.22
19
PP
_1777
phosphomannomutase
no
0.22
20
PP
_5218
DedA family protein
no
0.21
Or look for
negative cofitness