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  • Top cofit genes for PP_0142 from Pseudomonas putida KT2440

    putative ABC transporter, permease protein
    SEED: ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3680 conserved protein of unknown function no 0.22
    2 PP_4455 glutathione ABC transporter permease subunit no 0.20
    3 PP_0149 conserved exported protein of unknown function no 0.19
    4 PP_5404 Transposition protein, TnsC-related protein no 0.19
    5 PP_2266 DNA-directed RNA polymerase, bacteriophage and mitochondrial type no 0.19
    6 PP_0160 putative ferrioxamine receptor no 0.19
    7 PP_4420 transposase no 0.19
    8 PP_4094 conserved protein of unknown function no 0.18
    9 PP_5737 conserved protein of unknown function no 0.18
    10 PP_1118 Recombinase-related protein no 0.18
    11 PP_1944 putative Aminomethyltransferase no 0.18
    12 PP_5387 probable copper efflux transporter, CzcA family no 0.18
    13 PP_3681 putative Helicase no 0.18
    14 PP_5384 copper sensor protein 0.55 0.17
    15 PP_3691 DNA helicase-related protein no 0.17
    16 PP_1115 putative Lipoprotein no 0.17
    17 PP_4675 methionine sulfoxide reductase heme-binding subunit no 0.17
    18 PP_5463 conserved protein of unknown function no 0.17
    19 PP_1953 Oxidoreductase, short chain dehydrogenase/reductase family no 0.17
    20 PP_3784 conserved protein of unknown function no 0.17

    Or look for negative cofitness