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  • Top cofit genes for PP_0133 from Pseudomonas putida KT2440

    Alginate biosynthesis transcriptional regulatory protein AlgB
    KEGG: two-component system, NtrC family, response regulator AlgB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0132 Alginate biosynthesis sensor protein KinB 0.82 0.37
    2 PP_3762 Response regulator 0.70 0.22
    3 PP_1792 Glycosyl transferase, group 2 family protein no 0.20
    4 PP_3842 conserved protein of unknown function no 0.20
    5 PP_0137 glutamate/aspartate-proton DAACS transporter 0.74 0.18
    6 PP_1793 Glycosyl transferase, group 2 family protein no 0.17
    7 PP_4734 DNA-binding transcriptional dual regulator, LldR-L-lactate 0.32 0.17
    8 PP_2664 putative hybrid sensor and regulator, histidine kinase 0.21 0.17
    9 PP_0146 putative transport protein 0.64 0.17
    10 PP_3690 conserved protein of unknown function no 0.17
    11 PP_1080 putative oxidoreductase molybdopterin-binding 0.58 0.17
    12 PP_4675 methionine sulfoxide reductase heme-binding subunit no 0.17
    13 PP_1875 Sensor histidine kinase/response regulator 0.72 0.16
    14 PP_0134 conserved exported protein of unknown function no 0.16
    15 PP_1795 conserved protein of unknown function no 0.16
    16 PP_1761 diguanylate cyclase with phosphodiesterase domain 0.33 0.16
    17 PP_3836 conserved protein of unknown function no 0.16
    18 PP_2273 DNA polymerase I from phage origin no 0.16
    19 PP_0149 conserved exported protein of unknown function no 0.16
    20 PP_1067 Sensor histidine kinase 0.64 0.15

    Or look for negative cofitness