Top cofit genes for PP_0129 from Pseudomonas putida KT2440

GGDEF domain protein
SEED: GGDEF domain protein
KEGG: diguanylate cyclase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3662		conserved protein of unknown function	0.71	0.41
2	PP_1291		PhoH family protein	0.39	0.40
3	PP_3691		DNA helicase-related protein	no	0.39
4	PP_1993		putative motility protein fimV	no	0.38
5	PP_0422		Indole-3-glycerol phosphate synthase	0.72	0.34
6	PP_2001		O-succinylhomoserine sulfhydrylase	0.71	0.34
7	PP_0417		Anthranilate synthase component 1	0.73	0.33
8	PP_1995		N-(5'-phosphoribosyl)anthranilate isomerase	0.76	0.33
9	PP_0421		Anthranilate phosphoribosyltransferase	0.73	0.33
10	PP_5097		homoserine O-acetyltransferase	0.73	0.32
11	PP_5098		methionine biosynthesis protein MetW	0.72	0.32
12	PP_2327		transcriptional dual regulator / CysB-O-acetyl-L-serine	0.72	0.31
13	PP_0420		aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex	0.67	0.31
14	PP_1988		3-isopropylmalate dehydrogenase	0.75	0.31
15	PP_1985		3-isopropylmalate dehydratase large subunit	0.73	0.31
16	PP_2168		Transaldolase	no	0.30
17	PP_3999		Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase	0.74	0.30
18	PP_0967		histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data)	0.73	0.30
19	PP_4679		acetohydroxybutanoate synthase / acetolactate synthase	0.73	0.30
20	PP_0083		tryptophan synthase beta chain	0.75	0.29

Or look for negative cofitness