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  • Top cofit genes for PP_0123 from Pseudomonas putida KT2440

    DNA polymerase I, 5
    SEED: DNA polymerase I (EC 2.7.7.7)
    KEGG: DNA polymerase I

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.81 0.59
    2 PP_5310 junction-specific ATP-dependent DNA helicase 0.80 0.59
    3 PP_4880 exoribonuclease R 0.81 0.52
    4 PP_4546 ATP-dependent helicase HrpA no 0.49
    5 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.57 0.48
    6 PP_2475 Transcriptional regulator, TetR family 0.34 0.48
    7 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.47
    8 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.63 0.47
    9 PP_1734 Probable septum site-determining protein MinC 0.43 0.47
    10 PP_4722 Transcription elongation factor GreA 0.60 0.47
    11 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.94 0.46
    12 PP_3649 Transcriptional regulator, GntR family 0.83 0.46
    13 PP_1629 Protein RecA 0.93 0.46
    14 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.65 0.45
    15 PP_4943 putative Glycosyl transferase 0.64 0.44
    16 PP_4124 NADH-quinone oxidoreductase subunit G 0.75 0.44
    17 PP_2319 conserved protein of unknown function no 0.44
    18 PP_5294 Ribonuclease PH 0.63 0.44
    19 PP_2223 conserved protein of unknown function no 0.43
    20 PP_4004 DNA translocase FtsK 0.45 0.43

    Or look for negative cofitness