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  • Top cofit genes for PP_0120 from Pseudomonas putida KT2440

    putative zinc ABC transporter
    SEED: Zinc ABC transporter, periplasmic-binding protein ZnuA
    KEGG: zinc transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0117 Zn(2+) ABC transporter - permease subunit 0.99 0.82
    2 PP_0118 zinc import ATP-binding protein 0.99 0.80
    3 PP_0119 putative zinc uptake regulation protein ZUR 0.71 0.48
    4 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.78 0.39
    5 PP_2388 Transporter, LysE family no 0.35
    6 PP_2390 Transcriptional regulator, LysR family no 0.34
    7 PP_3790 diaminopimelate epimerase no 0.30
    8 PP_4684 conserved protein of unknown function with kinase-like domain 0.51 0.30
    9 PP_3786 aminotransferase no 0.29
    10 PP_3788 putative Non-ribosomal peptide synthetase no 0.29
    11 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase no 0.29
    12 PP_3787 conserved protein of unknown function no 0.28
    13 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase 0.57 0.28
    14 PP_1426 L-aspartate oxidase 0.72 0.27
    15 PP_3376 putative phosphonate dehydrogenase no 0.27
    16 PP_4754 Transcriptional regulator, TetR family no 0.27
    17 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase 0.61 0.26
    18 PP_4922 Phosphomethylpyrimidine synthase 0.82 0.26
    19 PP_2714 Sensor histidine kinase no 0.26
    20 PP_0260 ADP-sugar pyrophosphorylase 0.36 0.26

    Or look for negative cofitness