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  • Top cofit genes for PP_0117 from Pseudomonas putida KT2440

    Zn(2+) ABC transporter - permease subunit
    SEED: Zinc ABC transporter, inner membrane permease protein ZnuB
    KEGG: zinc transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0120 putative zinc ABC transporter 0.99 0.82
    2 PP_0118 zinc import ATP-binding protein 0.99 0.80
    3 PP_0119 putative zinc uptake regulation protein ZUR 0.73 0.44
    4 PP_2388 Transporter, LysE family no 0.31
    5 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding 0.67 0.31
    6 PP_2390 Transcriptional regulator, LysR family no 0.29
    7 PP_4993 Glutathione synthetase 0.65 0.29
    8 PP_4684 conserved protein of unknown function with kinase-like domain 0.52 0.27
    9 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase 0.71 0.27
    10 PP_1426 L-aspartate oxidase 0.42 0.26
    11 PP_3736 vanillate O-demethylase oxygenase subunit no 0.26
    12 PP_3737 vanillate O-demethylase oxidoreductase no 0.26
    13 PP_1377 beta-ketoadipyl-CoA thiolase 0.46 0.25
    14 PP_3443 putative glyceraldehyde-3-phosphate dehydrogenase 0.21 0.25
    15 PP_4754 Transcriptional regulator, TetR family no 0.25
    16 PP_1378 alpha-ketoglutarate permease 0.47 0.24
    17 PP_4342 flagellar synthesis regulator, putative ATPase no 0.24
    18 PP_1616 formaldehyde dehydrogenase, glutathione-dependent no 0.24
    19 PP_1367 formyltetrahydrofolate hydrolase 0.66 0.24
    20 PP_1380 3-oxoadipate enol-lactonase 2 0.37 0.23

    Or look for negative cofitness