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  • Top cofit genes for PP_0116 from Pseudomonas putida KT2440

    putative lipoprotein
    SEED: Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2028 conserved protein of unknown function containing tetratricopeptide (TPR) domain repeat 0.89 0.38
    2 PP_1036 membrane-bound lytic murein transglycosylase F 0.77 0.38
    3 PP_2027 conserved exported protein of unknown function 0.87 0.35
    4 PP_2030 conserved protein of unknown function 0.81 0.33
    5 PP_4385 flagellar basal-body rod protein FlgG 0.25 0.29
    6 PP_4389 Flagellar basal-body rod modification protein FlgD no 0.26
    7 PP_1087 Outer membrane protein, OmpA family 0.24 0.26
    8 PP_2032 putative ATPase 0.89 0.26
    9 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon no 0.26
    10 PP_4384 Flagellar L-ring protein 0.70 0.25
    11 PP_4367 Flagellar assembly protein FliH no 0.25
    12 PP_4388 Flagellar hook protein FlgE 0.72 0.25
    13 PP_1970 putative Lipoprotein 0.19 0.25
    14 PP_4358 flagellar synthesis, switching and energizing component 0.52 0.25
    15 PP_4366 flagellum-specific ATP synthase 0.78 0.24
    16 PP_4386 flagellar basal-body rod protein FlgF 0.27 0.24
    17 PP_4381 Flagellar hook-associated protein FlgK 0.67 0.24
    18 PP_4344 flagellar export pore protein 0.73 0.24
    19 PP_4383 Flagellar P-ring protein 0.25 0.24
    20 PP_1355 Muropeptide permease AmpG no 0.24

    Or look for negative cofitness