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  • Top cofit genes for PP_0109 from Pseudomonas putida KT2440

    conserved membrane protein of unknown function
    SEED: Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA
    KEGG: cytochrome c oxidase subunit XV assembly protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4158 sensor protein 0.76 0.27
    2 PP_3182 GGDEF domain protein no 0.21
    3 PP_0104 Cytochrome c oxidase subunit 1 0.96 0.20
    4 PP_3649 Transcriptional regulator, GntR family no 0.19
    5 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.54 0.17
    6 PP_4120 NADH-quinone oxidoreductase subunit B 0.57 0.17
    7 PP_0951 Ribosome hibernation promoting factor 0.80 0.17
    8 PP_1428 Sigma factor AlgU negative regulatory protein no 0.16
    9 PP_1640 putative inner membrane protein of unknown function 0.39 0.16
    10 PP_1758 putative sulfurtransferase containing rhodanese-like domain 0.88 0.16
    11 PP_4286 allantoinase 0.76 0.16
    12 PP_2286 conserved protein of unknown function no 0.16
    13 PP_0397 protein kinase 0.66 0.15
    14 PP_0396 conserved protein of unknown function 0.70 0.15
    15 PP_2601 Transcriptional regulator, IclR family no 0.15
    16 PP_3166 catechol 1,2-dioxygenase no 0.15
    17 PP_0395 putative type IV piliation protein 0.69 0.15
    18 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon 0.68 0.14
    19 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.54 0.14
    20 PP_5496 conserved exported protein of unknown function no 0.14

    Or look for negative cofitness