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  • Top cofit genes for PP_0107 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0104 Cytochrome c oxidase subunit 1 0.96 0.28
    2 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.85 0.22
    3 PP_0106 cytochrome c oxidase subunit 3 0.96 0.20
    4 PP_4507 potassium transporter 0.57 0.19
    5 PP_0103 cytochrome c oxidase subunit 2 0.94 0.19
    6 PP_t12 tRNA-Thr no 0.19
    7 PP_0951 Ribosome hibernation promoting factor 0.49 0.18
    8 PP_2862 Undecaprenyl-diphosphatase no 0.18
    9 PP_0099 conserved protein of unknown function no 0.17
    10 PP_3484 Response regulator receiver protein no 0.17
    11 PP_1251 malate:quinone oxidoreductase no 0.17
    12 PP_1906 ribosomal large subunit pseudouridine synthase C 0.86 0.16
    13 PP_5502 ribosome modulation factor no 0.15
    14 PP_0377 coenzyme PQQ synthesis protein D no 0.15
    15 PP_0379 Coenzyme PQQ synthesis protein B 0.34 0.15
    16 PP_4918 conserved protein of unknown function no 0.15
    17 PP_0397 protein kinase 0.64 0.14
    18 PP_2987 conserved protein of unknown function no 0.14
    19 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E 0.27 0.14
    20 PP_0396 conserved protein of unknown function 0.69 0.14

    Or look for negative cofitness