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  • Top cofit genes for PP_0082 from Pseudomonas putida KT2440

    tryptophan synthase alpha chain
    SEED: Tryptophan synthase alpha chain (EC 4.2.1.20)
    KEGG: tryptophan synthase alpha chain

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0083 tryptophan synthase beta chain 1.00 0.95
    2 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase 0.99 0.88
    3 PP_5128 Dihydroxy-acid dehydratase 0.99 0.88
    4 PP_0421 Anthranilate phosphoribosyltransferase 0.99 0.87
    5 PP_4678 Ketol-acid reductoisomerase 0.99 0.87
    6 PP_0289 Imidazoleglycerol-phosphate dehydratase 0.98 0.87
    7 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.99 0.87
    8 PP_0422 Indole-3-glycerol phosphate synthase 0.99 0.85
    9 PP_0417 Anthranilate synthase component 1 0.99 0.85
    10 PP_1988 3-isopropylmalate dehydrogenase 1.00 0.84
    11 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.99 0.84
    12 PP_0966 Histidinol dehydrogenase 0.99 0.84
    13 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.99 0.83
    14 PP_1986 3-isopropylmalate dehydratase small subunit 0.98 0.83
    15 PP_0290 Imidazole glycerol phosphate synthase subunit HisH 0.98 0.83
    16 PP_3511 Branched-chain-amino-acid aminotransferase 0.99 0.82
    17 PP_1985 3-isopropylmalate dehydratase large subunit 0.98 0.82
    18 PP_5098 methionine biosynthesis protein MetW 0.99 0.82
    19 PP_5014 Phosphoribosyl-AMP cyclohydrolase 0.98 0.82
    20 PP_0184 Argininosuccinate lyase 0.97 0.82

    Or look for negative cofitness